Zixuan Cang

ScholarGPS® ID: 85911156600341

Affiliation

University of California, Irvine, Irvine, United States

Affiliation History

Field

Physical Sciences and Mathematics

Discipline

Mathematics

Top Specialties

Transcriptomics Technologies | Topology | Computational Biology

Metrics Summary

Publication Count

Predicted Citations

1,701

Predicted h-index

Ranking

Publications and Citation History

Publications based on Top Specialties

Types of Publication

Publications
Books
Patents
NIH/NSF

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Topological and geometric analysis of cell states in single-cell transcriptomic data (journal article) Huynh, Tram \| Cang, Zixuan Briefings in Bioinformatics, volume 25, issue 3 (2024). 10.1093/bib/bbae176 Cited by (1) \| Cite \| Source
Poisson-Boltzmann-based machine learning model for electrostatic analysis (journal article) Chen, Jiahui \| Xu, Yongjia \| Yang, Xin \| Cang, Zixuan \| Geng, Weihua \| Wei, Guo-Wei Biophysical Journal (2024). 10.1016/j.bpj.2024.02.008 Cite \| Source
AVIDA: An alternating method for visualizing and integrating data (journal article) Dover, Kathryn \| Cang, Zixuan \| Ma, Anna \| Nie, Qing \| Vershynin, Roman Journal of Computational Science, volume 68 (2023). 10.1016/j.jocs.2023.101998 Cited by (1) \| Cite \| Source
Screening cell–cell communication in spatial transcriptomics via collective optimal transport (journal article) Cang, Zixuan \| Zhao, Yanxiang \| Almet, Axel A. \| Stabell, Adam \| Ramos, Raul \| Plikus, Maksim V. \| Atwood, Scott X. \| Nie, Qing Nature Methods, volume 20, issue 2, pages 218-228 (2023). 10.1038/s41592-022-01728-4 Cited by (58) \| Cite \| Source
Supervised Optimal Transport (journal article) Cang, Zixuan \| Nie, Qing \| Zhao, Yanxiang SIAM Journal on Applied Mathematics, volume 82, issue 5, pages 1851-1877 (2022). 10.1137/22M1469171 Cited by (1) \| Cite \| Source
Identifying multicellular spatiotemporal organization of cells with SpaceFlow (journal article) Ren, Honglei \| Walker, Benjamin L. \| Cang, Zixuan \| Nie, Qing Nature Communications, volume 13, issue 1 (2022). 10.1038/s41467-022-31739-w Cited by (38) \| Cite \| Source
Deciphering tissue structure and function using spatial transcriptomics (journal article) Walker, Benjamin L. \| Cang, Zixuan \| Ren, Honglei \| Bourgain-Chang, Eric \| Nie, Qing Communications Biology, volume 5, issue 1 (2022). 10.1038/s42003-022-03175-5 Cited by (37) \| Cite \| Source
Single-cell transcriptomic analysis of zebrafish cranial neural crest reveals spatiotemporal regulation of lineage decisions during development (journal article) Tatarakis, David \| Cang, Zixuan \| Wu, Xiaojun \| Sharma, Praveer P. \| Karikomi, Matthew \| MacLean, Adam L. \| Nie, Qing \| Schilling, Thomas F. Cell Reports, volume 37, issue 12, pages 110140- (2021). 10.1016/j.celrep.2021.110140 Cited by (24) \| Cite \| Source
A Study of Gene Expression, Structure, and Contractility of iPSC-Derived Cardiac Myocytes from a Family with Heart Disease due to LMNA Mutation (journal article) Mehrabi, Mehrsa \| Morris, Tessa A. \| Cang, Zixuan \| Nguyen, Cecilia H. H. \| Sha, Yutong \| Asad, Mira N. \| Khachikyan, Nyree \| Greene, Taylor L. \| Becker, Danielle M. \| Nie, Qing \| ... \| Grosberg, Anna Annals of Biomedical Engineering, volume 49, issue 12, pages 3524-3539 (2021). 10.1007/s10439-021-02850-8 Cited by (4) \| Cite \| Source
Charge substitutions at the voltage-sensing module of domain III enhance actions of site-3 and site-4 toxins on an insect sodium channel (journal article) Zhu, Qing \| Du, Yuzhe \| Nomura, Yoshiko \| Gao, Rong \| Cang, Zixuan \| Wei, Guo-Wei \| Gordon, Dalia \| Gurevitz, Michael \| Groome, James \| Dong, Ke Insect Biochemistry and Molecular Biology, volume 137 (2021). 10.1016/j.ibmb.2021.103625 Cited by (2) \| Cite \| Source
The landscape of cell–cell communication through single-cell transcriptomics (journal article) Almet, Axel A. \| Cang, Zixuan \| Jin, Suoqin \| Nie, Qing Current Opinion in Systems Biology, volume 26 (2021). 10.1016/j.coisb.2021.03.007 Cited by (87) \| Cite \| Source
A multiscale model via single-cell transcriptomics reveals robust patterning mechanisms during early mammalian embryo development (journal article) Cang, Zixuan \| Wang, Yangyang \| Wang, Qixuan \| Cho, Ken W. Y. \| Holmes, William \| Nie, Qing PLOS Computational Biology, volume 17, issue 3, pages e1008571- (2021). 10.1371/journal.pcbi.1008571 Cited by (9) \| Cite \| Source
Evolutionary homology on coupled dynamical systems with applications to protein flexibility analysis (journal article) Cang, Zixuan \| Munch, Elizabeth \| Wei, Guo-Wei Journal of Applied and Computational Topology, volume 4, issue 4, pages 481-507 (2020). 10.1007/s41468-020-00057-9 Cited by (6) \| Cite \| Source
Structural cavities are critical to balancing stability and activity of a membrane-integral enzyme (journal article) Guo, Ruiqiong \| Cang, Zixuan \| Yao, Jiaqi \| Kim, Miyeon \| Deans, Erin \| Wei, Guowei \| Kang, Seung-gu \| Hong, Heedeok Proceedings of the National Academy of Sciences, volume 117, issue 36, pages 22146-22156 (2020). 10.1073/pnas.1917770117 Cited by (22) \| Cite \| Source
Inferring spatial and signaling relationships between cells from single cell transcriptomic data (journal article) Cang, Zixuan \| Nie, Qing Nature Communications, volume 11, issue 1 (2020). 10.1038/s41467-020-15968-5 Cited by (174) \| Cite \| Source
Defining Epidermal Basal Cell States during Skin Homeostasis and Wound Healing Using Single-Cell Transcriptomics (journal article) Haensel, Daniel \| Jin, Suoqin \| Sun, Peng \| Cinco, Rachel \| Dragan, Morgan \| Nguyen, Quy \| Cang, Zixuan \| Gong, Yanwen \| Vu, Remy \| MacLean, Adam L. \| ... \| Dai, Xing Cell Reports, volume 30, issue 11, pages 3932-3947.e6 (2020). 10.1016/j.celrep.2020.02.091 Cited by (129) \| Cite \| Source
A review of mathematical representations of biomolecular data (journal article) Nguyen, Duc Duy \| Cang, Zixuan \| Wei, Guo-Wei Physical Chemistry Chemical Physics, volume 22, issue 8, pages 4343-4367 (2020). 10.1039/C9CP06554G Cited by (53) \| Cite \| Source
A topology-based network tree for the prediction of protein–protein binding affinity changes following mutation (journal article) Wang, Menglun \| Cang, Zixuan \| Wei, Guo-Wei Nature Machine Intelligence, volume 2, issue 2, pages 116-123 (2020). 10.1038/s42256-020-0149-6 Cited by (91) \| Cite \| Source
Persistent Cohomology for Data With Multicomponent Heterogeneous Information (journal article) Cang, Zixuan \| Wei, Guo-Wei SIAM Journal on Mathematics of Data Science, volume 2, issue 2, pages 396-418 (2020). 10.1137/19M1272226 Cited by (7) \| Cite \| Source
Defining Epidermal Basal Cell States During Skin Homeostasis and Wound Healing Using Single-Cell Transcriptomics (journal article) Haensel, Daniel \| Jin, Suoqin \| Cinco, Rachel \| Sun, Peng \| Nguyen, Quy H. \| Cang, Zixuan \| Dragan, Morgan \| Gong, Yanwen \| MacLean, Adam \| Kessenbrock, Kai \| ... \| Dai, Xing SSRN Electronic Journal (2019). 10.2139/ssrn.3464652 Cite \| Source