Georgios A. Pavlopoulos

ScholarGPS® ID: 82602335405536

Affiliation

National and Kapodistrian University of Athens, Athens, Greece

Affiliation History

Field

Life Sciences

Discipline

Biomedical Sciences

Top Specialties

Metrics Summary

Publication Count

Predicted Citations

6,072

Predicted h-index

Ranking

Publications and Citation History

Publications based on Top Specialties

Types of Publication

Publications
Books
Patents
NIH/NSF

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Visualizing metagenomic and metatranscriptomic data: A comprehensive review (journal article) Aplakidou, Eleni \| Vergoulidis, Nikolaos \| Chasapi, Maria \| Venetsianou, Nefeli K. \| Kokoli, Maria \| Panagiotopoulou, Eleni \| Iliopoulos, Ioannis \| Karatzas, Evangelos \| Pafilis, Evangelos \| Georgakopoulos-Soares, Ilias \| ... \| Baltoumas, Fotis A. Computational and Structural Biotechnology Journal, volume 23 (2024). 10.1016/j.csbj.2024.04.060 Cite \| Source
kmerDB: A database encompassing the set of genomic and proteomic sequence information for each species (journal article) Mouratidis, Ioannis \| Baltoumas, Fotis A. \| Chantzi, Nikol \| Patsakis, Michail \| Chan, Candace S.Y. \| Montgomery, Austin \| Konnaris, Maxwell A. \| Aplakidou, Eleni \| Georgakopoulos, George C. \| Das, Anshuman \| ... \| Georgakopoulos-Soares, Ilias Computational and Structural Biotechnology Journal, volume 23 (2024). 10.1016/j.csbj.2024.04.050 Cite \| Source
NMPFamsDB: a database of novel protein families from microbial metagenomes and metatranscriptomes (journal article) Baltoumas, Fotis A \| Karatzas, Evangelos \| Liu, Sirui \| Ovchinnikov, Sergey \| Sofianatos, Yorgos \| Chen, I-Min \| Kyrpides, Nikos C \| Pavlopoulos, Georgios A Nucleic Acids Research, volume 52, issue D1, pages D502-D512 (2024). 10.1093/nar/gkad800 Cited by (3) \| Cite \| Source
Arena3Dweb: interactive 3D visualization of multilayered networks supporting multiple directional information channels, clustering analysis and application integration (journal article) Kokoli, Maria \| Karatzas, Evangelos \| Baltoumas, Fotis A \| Schneider, Reinhard \| Pafilis, Evangelos \| Paragkamian, Savvas \| Doncheva, Nadezhda T \| Jensen, Lars Juhl \| Pavlopoulos, Georgios A NAR Genomics and Bioinformatics, volume 5, issue 2 (2023). 10.1093/nargab/lqad053 Cited by (4) \| Cite \| Source
Exploring microbial functional biodiversity at the protein family level—From metagenomic sequence reads to annotated protein clusters (journal article) Baltoumas, Fotis A. \| Karatzas, Evangelos \| Paez-Espino, David \| Venetsianou, Nefeli K. \| Aplakidou, Eleni \| Oulas, Anastasis \| Finn, Robert D. \| Ovchinnikov, Sergey \| Pafilis, Evangelos \| Kyrpides, Nikos C. \| Pavlopoulos, Georgios A. Frontiers in Bioinformatics, volume 3 (2023). 10.3389/fbinf.2023.1157956 Cited by (3) \| Cite \| Source
Drug genetic associations with COVID-19 manifestations: a data mining and network biology approach (journal article) Charitou, Theodosia \| Kontou, Panagiota I. \| Tamposis, Ioannis A. \| Pavlopoulos, Georgios A. \| Braliou, Georgia G. \| Bagos, Pantelis G. The Pharmacogenomics Journal, volume 22, issue 5-6, pages 294-302 (2022). 10.1038/s41397-022-00289-1 Cited by (4) \| Cite \| Source
IL-6 Signaling Attenuates TNF-α Production by Plasmacytoid Dendritic Cells in Rheumatoid Arthritis (journal article) Papadaki, Garyfalia \| Goutakoli, Panagiota \| Tiniakou, Ioanna \| Grün, Joachim R. \| Grützkau, Andreas \| Pavlopoulos, Georgios A. \| Iliopoulos, Ioannis \| Bertsias, George \| Boumpas, Dimitrios \| Ospelt, Caroline \| ... \| Verginis, Panayotis The Journal of Immunology, volume 209, issue 10, pages 1906-1917 (2022). 10.4049/jimmunol.2100882 Cited by (7) \| Cite \| Source
Extreme-Scale Many-against-Many Protein Similarity Search (conference) Selvitopi, Oguz \| Ekanayake, Saliya \| Guidi, Giulia \| Awan, Muaaz G. \| Pavlopoulos, Georgios A. \| Azad, Ariful \| Kyrpides, Nikos \| Oliker, Leonid \| Yelick, Katherine \| Buluç, Aydin SC22: International Conference for High Performance Computing, Networking, Storage and Analysis (2022) Dallas, TX, USA 10.1109/SC41404.2022.00006 Cited by (2) \| Cite \| Source
Bee foraging preferences, microbiota and pathogens revealed by direct shotgun metagenomics of honey (journal article) Galanis, Anastasios \| Vardakas, Philippos \| Reczko, Martin \| Harokopos, Vaggelis \| Hatzis, Pantelis \| Skoulakis, Efthimios M. C. \| Pavlopoulos, Georgios A. \| Patalano, Solenn Molecular Ecology Resources, volume 22, issue 7, pages 2506-2523 (2022). 10.1111/1755-0998.13626 Cited by (8) \| Cite \| Source
Prediction and Ranking of Biomarkers Using multiple UniReD (journal article) Baltsavia, Ismini \| Theodosiou, Theodosios \| Papanikolaou, Nikolas \| Pavlopoulos, Georgios A. \| Amoutzias, Grigorios D. \| Panagopoulou, Maria \| Chatzaki, Ekaterini \| Andreakos, Evangelos \| Iliopoulos, Ioannis International Journal of Molecular Sciences, volume 23, issue 19, pages 11112- (2022). 10.3390/ijms231911112 Cited by (1) \| Cite \| Source
NORMA: The Network Makeup Artist — A Web Tool for Network Annotation Visualization (journal article) Koutrouli, Mikaela \| Karatzas, Evangelos \| Papanikolopoulou, Katerina \| Pavlopoulos, Georgios A. Genomics, Proteomics & Bioinformatics, volume 20, issue 3, pages 578-586 (2022). 10.1016/j.gpb.2021.02.005 Cited by (5) \| Cite \| Source
Protocol for unbiased, consolidated variant calling from whole exome sequencing data (journal article) Verrou, Kleio-Maria \| Pavlopoulos, Georgios A. \| Moulos, Panagiotis STAR Protocols, volume 3, issue 2, pages 101418- (2022). 10.1016/j.xpro.2022.101418 Cited by (1) \| Cite \| Source
Darling: A Web Application for Detecting Disease-Related Biomedical Entity Associations with Literature Mining (journal article) Karatzas, Evangelos \| Baltoumas, Fotis A. \| Kasionis, Ioannis \| Sanoudou, Despina \| Eliopoulos, Aristides G. \| Theodosiou, Theodosios \| Iliopoulos, Ioannis \| Pavlopoulos, Georgios A. Biomolecules, volume 12, issue 4, pages 520- (2022). 10.3390/biom12040520 Cited by (11) \| Cite \| Source
PREGO: A Literature and Data-Mining Resource to Associate Microorganisms, Biological Processes, and Environment Types (journal article) Zafeiropoulos, Haris \| Paragkamian, Savvas \| Ninidakis, Stelios \| Pavlopoulos, Georgios A. \| Jensen, Lars Juhl \| Pafilis, Evangelos Microorganisms, volume 10, issue 2, pages 293- (2022). 10.3390/microorganisms10020293 Cited by (13) \| Cite \| Source
The network makeup artist (NORMA-2.0): distinguishing annotated groups in a network using innovative layout strategies (journal article) Karatzas, Evangelos \| Koutrouli, Mikaela \| Baltoumas, Fotis A \| Papanikolopoulou, Katerina \| Bouyioukos, Costas \| Pavlopoulos, Georgios A Bioinformatics Advances, volume 2, issue 1 (2022). 10.1093/bioadv/vbac036 Cited by (4) \| Cite \| Source
The human GPCR signal transduction network (journal article) Kontou, Panagiota \| Pavlopoulou, Athanasia \| Dimou, Niki \| Theodoropoulou, Margarita \| Braliou, Georgia \| Tsaousis, Georgios \| Pavlopoulos, Georgios \| Hamodrakas, Stavros \| Bagos, Pantelis Network Modeling Analysis in Health Informatics and Bioinformatics, volume 10, issue 1 (2021). 10.1007/s13721-020-00278-z Cited by (1) \| Cite \| Source
Blood Transcriptomes of Anti-SARS-CoV-2 Antibody-Positive Healthy Individuals Who Experienced Asymptomatic Versus Clinical Infection (journal article) Sfikakis, Petros P. \| Verrou, Kleio-Maria \| Ampatziadis-Michailidis, Giannis \| Tsitsilonis, Ourania \| Paraskevis, Dimitrios \| Kastritis, Efstathios \| Lianidou, Evi \| Moutsatsou, Paraskevi \| Terpos, Evangelos \| Trougakos, Ioannis \| ... \| Dimopoulos, Meletios A. Frontiers in Immunology, volume 12 (2021). 10.3389/fimmu.2021.746203 Cited by (8) \| Cite \| Source
OnTheFly2.0: a text-mining web application for automated biomedical entity recognition, document annotation, network and functional enrichment analysis (journal article) Baltoumas, Fotis A \| Zafeiropoulou, Sofia \| Karatzas, Evangelos \| Paragkamian, Savvas \| Thanati, Foteini \| Iliopoulos, Ioannis \| Eliopoulos, Aristides G \| Schneider, Reinhard \| Jensen, Lars Juhl \| Pafilis, Evangelos \| Pavlopoulos, Georgios A NAR Genomics and Bioinformatics, volume 3, issue 4 (2021). 10.1093/nargab/lqab090 Cited by (12) \| Cite \| Source
Distinct transcriptional profile of blood mononuclear cells in Behçet’s disease: insights into the central role of neutrophil chemotaxis (journal article) Verrou, Kleio-Maria \| Vlachogiannis, Nikolaos I \| Ampatziadis-Michailidis, Giannis \| Moulos, Panagiotis \| Pavlopoulos, Georgios A \| Hatzis, Pantelis \| Kollias, George \| Sfikakis, Petros P Rheumatology, volume 60, issue 10, pages 4910-4919 (2021). 10.1093/rheumatology/keab052 Cited by (17) \| Cite \| Source
VICTOR: A visual analytics web application for comparing cluster sets (journal article) Karatzas, Evangelos \| Gkonta, Maria \| Hotova, Joana \| Baltoumas, Fotis A. \| Kontou, Panagiota I. \| Bobotsis, Christopher J. \| Bagos, Pantelis G. \| Pavlopoulos, Georgios A. Computers in Biology and Medicine, volume 135 (2021). 10.1016/j.compbiomed.2021.104557 Cited by (5) \| Cite \| Source