Toby J. Gibson

ScholarGPS™ ID: 81242281887680

Highly Ranked Scholar - Lifetime:

#9550

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Affiliation

European Molecular Biology Laboratory, {{Plainlist, Germany

Affiliation History

Field

Life Sciences

Discipline

Biology and Biological Sciences

Top Specialties

Metrics Summary

Publication Count

123

Predicted Citations

122,167

Predicted h-index

Ranking

Publications and Citation History

Publications based on Top Specialties

Types of Publication

Publications
Books
Patents
NIH/NSF


The Eukaryotic Linear Motif resource: 2022 release (journal article) Kumar, Manjeet \| Michael, Sushama \| Alvarado-Valverde, Jesús \| Mészáros, Bálint \| Sámano-Sánchez, Hugo \| Zeke, András \| Dobson, Laszlo \| Lazar, Tamas \| Örd, Mihkel \| Nagpal, Anurag \| ... \| Gibson, Toby J Nucleic Acids Research, volume 50, issue D1, pages D497-D508 (2022). 10.1093/nar/gkab975 Cited by (23) \| Cite \| Source
Short linear motif candidates in the cell entry system used by SARS-CoV-2 and their potential therapeutic implications (journal article) Mészáros, Bálint \| Sámano-Sánchez, Hugo \| Alvarado-Valverde, Jesús \| Čalyševa, Jelena \| Martínez-Pérez, Elizabeth \| Alves, Renato \| Shields, Denis C. \| Kumar, Manjeet \| Rippmann, Friedrich \| Chemes, Lucía B. \| Gibson, Toby J. Science Signaling, volume 14, issue 665 (2021). 10.1126/scisignal.abd0334 Cited by (31) \| Cite \| Source
Divergent Evolution of a Protein–Protein Interaction Revealed through Ancestral Sequence Reconstruction and Resurrection (journal article) Laursen, Louise \| Čalyševa, Jelena \| Gibson, Toby J \| Jemth, Per Molecular Biology and Evolution, volume 38, issue 1, pages 152-167 (2021). 10.1093/molbev/msaa198 Cited by (2) \| Cite \| Source
Mimicry of Short Linear Motifs by Bacterial Pathogens: A Drugging Opportunity (journal article) Sámano-Sánchez, Hugo \| Gibson, Toby J. Trends in Biochemical Sciences, volume 45, issue 6, pages 526-544 (2020). 10.1016/j.tibs.2020.03.003 Cited by (18) \| Cite \| Source
How to Annotate and Submit a Short Linear Motif to the Eukaryotic Linear Motif Resource (book chapter) In Intrinsically Disordered Proteins Gouw, Marc \| Alvarado-Valverde, Jesús \| Čalyševa, Jelena \| Diella, Francesca \| Kumar, Manjeet \| Michael, Sushama \| Van Roey, Kim \| Dinkel, Holger \| Gibson, Toby J. Springer US (2020) 10.1007/978-1-0716-0524-0_4 Cited by (3) \| Cite \| Source
The articles.ELM resource: simplifying access to protein linear motif literature by annotation, text-mining and classification (journal article) Palopoli, N \| Iserte, J A \| Chemes, L B \| Marino-Buslje, C \| Parisi, G \| Gibson, T J \| Davey, N E Database, volume 2020 (2020). 10.1093/database/baaa040 Cited by (3) \| Cite \| Source
ELM—the eukaryotic linear motif resource in 2020 (journal article) Kumar, Manjeet \| Gouw, Marc \| Michael, Sushama \| Sámano-Sánchez, Hugo \| Pancsa, Rita \| Glavina, Juliana \| Diakogianni, Athina \| Valverde, Jesús Alvarado \| Bukirova, Dayana \| Čalyševa, Jelena \| ... \| Gibson, Toby J Nucleic Acids Research (2019). 10.1093/nar/gkz1030 Cited by (72) \| Cite \| Source
Conserved SQ and QS motifs in bacterial effectors suggest pathogen interplay with the ATM kinase family during infection (journal article) Sampietro, Davide \| Sámano‐Sánchez, Hugo \| Davey, Norman E. \| Sharan, Malvika \| Meszaros, Balint \| Gibson, Toby J. \| Kumar, Manjeet bioRxiv (2018). 10.1101/364117 Cited by (1) \| Cite \| Source \| Open Access
Control of mitotic chromosome condensation by the fission yeast transcription factor Zas1 (journal article) Schiklenk, Christoph \| Petrova, Boryana \| Kschonsak, Marc \| Hassler, Markus \| Klein, Carlo \| Gibson, Toby J. \| Haering, Christian H. Journal of Cell Biology, volume 217, issue 7, pages 2383-2401 (2018). 10.1083/jcb.201711097 Cited by (3) \| Cite \| Source \| Open Access
Short linear motif core and flanking regions modulate retinoblastoma protein binding affinity and specificity (journal article) Palopoli, Nicolás \| González Foutel, Nicolás S \| Gibson, Toby J \| Chemes, Lucía B Protein Engineering, Design and Selection, volume 31, issue 3, pages 69-77 (2018). 10.1093/protein/gzx068 Cited by (21) \| Cite \| Source
The eukaryotic linear motif resource – 2018 update (journal article) Gouw, Marc \| Michael, Sushama \| Sámano-Sánchez, Hugo \| Kumar, Manjeet \| Zeke, András \| Lang, Benjamin \| Bely, Benoit \| Chemes, Lucía B \| Davey, Norman E \| Deng, Ziqi \| ... \| Gibson, Toby J Nucleic Acids Research, volume 46, issue D1, pages D428-D434 (2018). 10.1093/nar/gkx1077 Cited by (128) \| Cite \| Source \| Open Access
CTCF-Mediated Chromatin Loops between Promoter and Gene Body Regulate Alternative Splicing across Individuals (journal article) Ruiz-Velasco, Mariana \| Kumar, Manjeet \| Lai, Mang Ching \| Bhat, Pooja \| Solis-Pinson, Ana Belen \| Reyes, Alejandro \| Kleinsorg, Stefan \| Noh, Kyung-Min \| Gibson, Toby J. \| Zaugg, Judith B. Cell Systems, volume 5, issue 6, pages 628-637.e6 (2017). 10.1016/j.cels.2017.10.018 Cited by (51) \| Cite \| Source
The Gene Ontology of eukaryotic cilia and flagella (journal article) Roncaglia, Paola \| van Dam, Teunis J. P. \| Christie, Karen R. \| Nacheva, Lora \| Toedt, Grischa \| Huynen, Martijn A. \| Huntley, Rachael P. \| Gibson, Toby J. \| Lomax, Jane Cilia, volume 6, issue 1 (2017). 10.1186/s13630-017-0054-8 Cited by (3) \| Cite \| Source \| Open Access
Intermolecular base stacking mediates RNA-RNA interaction in a crystal structure of the RNA chaperone Hfq (journal article) Schulz, Eike C. \| Seiler, Markus \| Zuliani, Cecilia \| Voigt, Franka \| Rybin, Vladimir \| Pogenberg, Vivian \| Mücke, Norbert \| Wilmanns, Matthias \| Gibson, Toby J. \| Barabas, Orsolya Scientific Reports, volume 7, issue 1 (2017). 10.1038/s41598-017-10085-8 Cited by (8) \| Cite \| Source \| Open Access
Exploring Short Linear Motifs Using the ELM Database and Tools (journal article) Gouw, Marc \| Sámano‐Sánchez, Hugo \| Van Roey, Kim \| Diella, Francesca \| Gibson, Toby J. \| Dinkel, Holger Current Protocols in Bioinformatics, volume 58, issue 1 (2017). 10.1002/cpbi.26 Cited by (20) \| Cite \| Source
Metabolic shifts in residual breast cancer drive tumor recurrence (journal article) Havas, Kristina M. \| Milchevskaya, Vladislava \| Radic, Ksenija \| Alladin, Ashna \| Kafkia, Eleni \| Garcia, Marta \| Stolte, Jens \| Klaus, Bernd \| Rotmensz, Nicole \| Gibson, Toby J. \| ... \| Jechlinger, Martin Journal of Clinical Investigation, volume 127, issue 6, pages 2091-2105 (2017). 10.1172/JCI89914 Cited by (89) \| Cite \| Source \| Open Access
Degrons in cancer (journal article) Mészáros, Bálint \| Kumar, Manjeet \| Gibson, Toby J. \| Uyar, Bora \| Dosztányi, Zsuzsanna Science Signaling, volume 10, issue 470 (2017). 10.1126/scisignal.aak9982 Cited by (65) \| Cite \| Source \| Open Access
Towards the gene ontology of the eukaryotic cilia and flagella (journal article) Roncaglia, Paola \| Dam, Teunis J. P. van \| Christie, Karen R. \| Nacheva, Lora \| Huynen, Martijn A. \| Huntley, Rachael P. \| Gibson, Toby J. \| Lomax, Jane F1000Research, volume 5 (2016). 10.7490/f1000research.1113234.1 Cited by (1) \| Cite \| Source
Hunting for Cis-Regulatory Elements in Proteins (journal article) Gibson, Toby J. \| Kumar, Manjeet Cell Systems, volume 2, issue 2, pages 68-70 (2016). 10.1016/j.cels.2016.02.011 Cited by (1) \| Cite \| Source \| Open Access
ELM 2016—data update and new functionality of the eukaryotic linear motif resource (journal article) Dinkel, Holger \| Van Roey, Kim \| Michael, Sushama \| Kumar, Manjeet \| Uyar, Bora \| Altenberg, Brigitte \| Milchevskaya, Vladislava \| Schneider, Melanie \| Kühn, Helen \| Behrendt, Annika \| ... \| Gibson, Toby J. Nucleic Acids Research, volume 44, issue D1, pages D294-D300 (2016). 10.1093/nar/gkv1291 Cited by (231) \| Cite \| Source \| Open Access