Stephen B. Montgomery

ScholarGPS® ID: 77806814955547

Affiliation
Stanford University, Stanford, United States
Affiliation History

Field
Life Sciences
Discipline
Genetics
Top Specialties
Gene Expression | Genomics | Human Genetics | Transcriptome | RNA | Coronary Artery Disease | RNA-Seq | Transcriptomics Technologies | Cis-regulatory Element | Computational Biology | Coronary Arteries
Metrics Summary
Publication Count
108
Predicted Citations
13,500
Predicted h-index
53
Ranking

Publications and Citation History

Publications based on Top Specialties

Types of Publication

  • Publications
  • Books
  • Patents
  • NIH/NSF
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RNA Sequencing in Disease Diagnosis (journal article)
Smail, Craig | Montgomery, Stephen B.
Annual Review of Genomics and Human Genetics, volume 25, issue 1 (2024).
10.1146/annurev-genom-021623-121812
Cite | Source
Genetic architecture of cardiac dynamic flow volumes (journal article)
Gomes, Bruna | Singh, Aditya | O’Sullivan, Jack W. | Schnurr, Theresia M. | Goddard, Pagé C. | Loong, Shaun | Amar, David | Hughes, J. Weston | Kostur, Mykhailo | Haddad, Francois | ... | Ashley, Euan A.
Nature Genetics, volume 56, issue 2, pages 245-257 (2024).
10.1038/s41588-023-01587-5
Cited by (2) | Cite | Source
Multi-Omic Profiling of Macrophages Lacking Tet2 or Dnmt3a Reveals Mechanisms of Hyper-Inflammation in Clonal Hematopoiesis (journal article)
Rodrigues, Kameron B | Gopakumar, Jayakrishnan | Weng, Ziming | Mitchell, Shaneice Renee | Maurer, Margaret | Nachun, Daniel | Eulalio, Tiffany | Estrada, Dorothy | Mazumder, Thomas | Ma, Lisa | ... | Jaiswal, Siddhartha
Blood, volume 142, issue Supplement 1, pages 1163-1163 (2023).
10.1182/blood-2023-187890
Cite | Source
Molecular quantitative trait loci (journal article)
Aguet, François | Alasoo, Kaur | Li, Yang I. | Battle, Alexis | Im, Hae Kyung | Montgomery, Stephen B. | Lappalainen, Tuuli
Nature Reviews Methods Primers, volume 3, issue 1 (2023).
10.1038/s43586-022-00188-6
Cited by (17) | Cite | Source
P643: Transcriptome sequencing increases yield of Mendelian disease diagnosis (journal article)
Bonner, Devon | Ungar, Rachel | Goddard, Page | Kohler, Jennefer | Reuter, Chloe | Marwaha, Shruti | Bernstein, Jonathan | Montgomery, Stephen | Wheeler, Matthew
Genetics in Medicine Open, volume 1, issue 1, pages 100708- (2023).
10.1016/j.gimo.2023.100708
Cite | Source
Methylation differences in Alzheimer’s disease neuropathologic change in the aged human brain (journal article)
Lang, Anna-Lena | Eulalio, Tiffany | Fox, Eddie | Yakabi, Koya | Bukhari, Syed A. | Kawas, Claudia H. | Corrada, Maria M. | Montgomery, Stephen B. | Heppner, Frank L. | Capper, David | ... | Montine, Thomas J.
Acta Neuropathologica Communications, volume 10, issue 1 (2022).
10.1186/s40478-022-01470-0
Cited by (11) | Cite | Source
RNA editing underlies genetic risk of common inflammatory diseases (journal article)
Li, Qin | Gloudemans, Michael J. | Geisinger, Jonathan M. | Fan, Boming | Aguet, François | Sun, Tao | Ramaswami, Gokul | Li, Yang I. | Ma, Jin-Biao | Pritchard, Jonathan K. | ... | Li, Jin Billy
Nature, volume 608, issue 7923, pages 569-577 (2022).
10.1038/s41586-022-05052-x
Cited by (64) | Cite | Source
Integration of rare expression outlier-associated variants improves polygenic risk prediction (journal article)
Smail, Craig | Ferraro, Nicole M. | Hui, Qin | Durrant, Matthew G. | Aguirre, Matthew | Tanigawa, Yosuke | Keever-Keigher, Marissa R. | Rao, Abhiram S. | Justesen, Johanne M. | Li, Xin | ... | Montgomery, Stephen B.
The American Journal of Human Genetics, volume 109, issue 6, pages 1055-1064 (2022).
10.1016/j.ajhg.2022.04.015
Cited by (10) | Cite | Source
Multiple causal variants underlie genetic associations in humans (journal article)
Abell, Nathan S. | DeGorter, Marianne K. | Gloudemans, Michael J. | Greenwald, Emily | Smith, Kevin S. | He, Zihuai | Montgomery, Stephen B.
Science, volume 375, issue 6586, pages 1247-1254 (2022).
10.1126/science.abj5117
Cited by (62) | Cite | Source
Integration of genetic colocalizations with physiological and pharmacological perturbations identifies cardiometabolic disease genes (journal article)
Gloudemans, Michael J. | Balliu, Brunilda | Nachun, Daniel | Schnurr, Theresia M. | Durrant, Matthew G. | Ingelsson, Erik | Wabitsch, Martin | Quertermous, Thomas | Montgomery, Stephen B. | Knowles, Joshua W. | Carcamo-Orive, Ivan
Genome Medicine, volume 14, issue 1 (2022).
10.1186/s13073-022-01036-8
Cited by (5) | Cite | Source
TOWARDS TRANSCRIPTOMICS AS A PRIMARY TOOL FOR RARE DISEASE INVESTIGATION (journal article)
Montgomery, Stephen B | Bernstein, Jonathan A | Wheeler, Matthew T
Molecular Case Studies (2022).
10.1101/mcs.a006198
Cited by (8) | Cite | Source
An integrated approach to identify environmental modulators of genetic risk factors for complex traits (journal article)
Balliu, Brunilda | Carcamo-Orive, Ivan | Gloudemans, Michael J. | Nachun, Daniel C. | Durrant, Matthew G. | Gazal, Steven | Park, Chong Y. | Knowles, David A. | Wabitsch, Martin | Quertermous, Thomas | ... | Montgomery, Stephen B.
The American Journal of Human Genetics, volume 108, issue 10, pages 1866-1879 (2021).
10.1016/j.ajhg.2021.08.014
Cited by (8) | Cite | Source
Lymphoid blast transformation in an MPN with BCR-JAK2 treated with ruxolitinib: putative mechanisms of resistance (journal article)
Chen, Justin Anthony | Hou, Yanli | Roskin, Krishna M. | Arber, Daniel A. | Bangs, Charles D. | Baughn, Linda B. | Cherry, Athena M. | Ewalt, Mark D. | Fire, Andrew Z. | Fresard, Laure | ... | Gotlib, Jason
Blood Advances, volume 5, issue 17, pages 3492-3496 (2021).
10.1182/bloodadvances.2020004174
Cited by (15) | Cite | Source
Genome-wide functional screen of 3′UTR variants uncovers causal variants for human disease and evolution (journal article)
Griesemer, Dustin | Xue, James R. | Reilly, Steven K. | Ulirsch, Jacob C. | Kukreja, Kalki | Davis, Joe R. | Kanai, Masahiro | Yang, David K. | Butts, John C. | Guney, Mehmet H. | ... | Sabeti, Pardis C.
Cell, volume 184, issue 20, pages 5247-5260.e19 (2021).
10.1016/j.cell.2021.08.025
Cited by (64) | Cite | Source
Nonsense-mediated decay is highly stable across individuals and tissues (journal article)
Teran, Nicole A. | Nachun, Daniel C. | Eulalio, Tiffany | Ferraro, Nicole M. | Smail, Craig | Rivas, Manuel A. | Montgomery, Stephen B.
The American Journal of Human Genetics, volume 108, issue 8, pages 1401-1408 (2021).
10.1016/j.ajhg.2021.06.008
Cited by (11) | Cite | Source
The role of Sp140 revealed in IgE and mast cell responses in Collaborative Cross mice (journal article)
Matsushita, Kazufumi | Li, Xin | Nakamura, Yuki | Dong, Danyue | Mukai, Kaori | Tsai, Mindy | Montgomery, Stephen B. | Galli, Stephen J.
JCI Insight, volume 6, issue 12 (2021).
10.1172/jci.insight.146572
Cited by (8) | Cite | Source
Identification of putative causal loci in whole-genome sequencing data via knockoff statistics (journal article)
He, Zihuai | Liu, Linxi | Wang, Chen | Le Guen, Yann | Lee, Justin | Gogarten, Stephanie | Lu, Fred | Montgomery, Stephen | Tang, Hua | Silverman, Edwin K. | ... | Ionita-Laza, Iuliana
Nature Communications, volume 12, issue 1 (2021).
10.1038/s41467-021-22889-4
Cited by (15) | Cite | Source
Evaluating the Genomic Parameters Governing rAAV-Mediated Homologous Recombination (journal article)
Spector, Laura P. | Tiffany, Matthew | Ferraro, Nicole M. | Abell, Nathan S. | Montgomery, Stephen B. | Kay, Mark A.
Molecular Therapy, volume 29, issue 3, pages 1028-1046 (2021).
10.1016/j.ymthe.2020.11.025
Cited by (6) | Cite | Source
Identification of rare and common regulatory variants in pluripotent cells using population-scale transcriptomics (journal article)
Bonder, Marc Jan | Smail, Craig | Gloudemans, Michael J. | Frésard, Laure | Jakubosky, David | D’Antonio, Matteo | Li, Xin | Ferraro, Nicole M. | Carcamo-Orive, Ivan | Mirauta, Bogdan | ... | Stegle, Oliver
Nature Genetics, volume 53, issue 3, pages 313-321 (2021).
10.1038/s41588-021-00800-7
Cited by (32) | Cite | Source
Exploiting the GTEx resources to decipher the mechanisms at GWAS loci (journal article)
Barbeira, Alvaro N. | Bonazzola, Rodrigo | Gamazon, Eric R. | Liang, Yanyu | Park, YoSon | Kim-Hellmuth, Sarah | Wang, Gao | Jiang, Zhuoxun | Zhou, Dan | Hormozdiari, Farhad | ... | Im, Hae Kyung
Genome Biology, volume 22, issue 1 (2021).
10.1186/s13059-020-02252-4
Cited by (115) | Cite | Source