Ben J. Woodcroft

ScholarGPS® ID: 55123097593896

Affiliation

University of Queensland, Brisbane, Queensland, Australia, Australia

Affiliation History

Field

Life Sciences

Discipline

Biology and Biological Sciences

Top Specialties

Melting | Bioinformatics | Graphical User Interface | Lake | Malaria

Metrics Summary

Publication Count

Predicted Citations

7,245

Predicted h-index

Ranking

Publications and Citation History

Publications based on Top Specialties

Types of Publication

Publications
Books
Patents
NIH/NSF

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Methylotrophy in the Mire: direct and indirect routes for methane production in thawing permafrost (journal article) Ellenbogen, Jared B. \| Borton, Mikayla A. \| McGivern, Bridget B. \| Cronin, Dylan R. \| Hoyt, David W. \| Freire-Zapata, Viviana \| McCalley, Carmody K. \| Varner, Ruth K. \| Crill, Patrick M. \| Wehr, Richard A. \| ... \| Wrighton, Kelly C. mSystems, volume 9, issue 1 (2024). 10.1128/msystems.00698-23 Cited by (2) \| Cite \| Source
Isolation and characterisation of novel Methanocorpusculum species indicates the genus is ancestrally host-associated (journal article) Volmer, James G. \| Soo, Rochelle M. \| Evans, Paul N. \| Hoedt, Emily C. \| Astorga Alsina, Ana L. \| Woodcroft, Benjamin J. \| Tyson, Gene W. \| Hugenholtz, Philip \| Morrison, Mark BMC Biology, volume 21, issue 1 (2023). 10.1186/s12915-023-01524-2 Cited by (5) \| Cite \| Source
Anaerobic methanotroph ‘Candidatus Methanoperedens nitroreducens’ has a pleomorphic life cycle (journal article) McIlroy, Simon J. \| Leu, Andy O. \| Zhang, Xueqin \| Newell, Rhys \| Woodcroft, Ben J. \| Yuan, Zhiguo \| Hu, Shihu \| Tyson, Gene W. Nature Microbiology, volume 8, issue 2, pages 321-331 (2023). 10.1038/s41564-022-01292-9 Cited by (15) \| Cite \| Source
Plant organic matter inputs exert a strong control on soil organic matter decomposition in a thawing permafrost peatland (journal article) Wilson, Rachel M. \| Hough, Moira A. \| Verbeke, Brittany A. \| Hodgkins, Suzanne B. \| Chanton, Jeff P. \| Saleska, Scott D. \| Rich, Virginia I. \| Tfaily, Malak M. \| Tyson, Gene \| Sullivan, Matthew B. \| ... \| Cooper, William T. Science of The Total Environment, volume 820 (2022). 10.1016/j.scitotenv.2021.152757 Cited by (17) \| Cite \| Source
Coupling plant litter quantity to a novel metric for litter quality explains C storage changes in a thawing permafrost peatland (journal article) Hough, Moira \| McCabe, Samantha \| Vining, S. Rose \| Pickering Pedersen, Emily \| Wilson, Rachel M. \| Lawrence, Ryan \| Chang, Kuang‐Yu \| Bohrer, Gil \| Riley, William J. \| Crill, Patrick M. \| ... \| Rich, Virginia I. Global Change Biology, volume 28, issue 3, pages 950-968 (2022). 10.1111/gcb.15970 Cited by (11) \| Cite \| Source
Successional dynamics and alternative stable states in a saline activated sludge microbial community over 9 years (journal article) Wang, Yulin \| Ye, Jun \| Ju, Feng \| Liu, Lei \| Boyd, Joel A. \| Deng, Yu \| Parks, Donovan H. \| Jiang, Xiaotao \| Yin, Xiaole \| Woodcroft, Ben J. \| ... \| Zhang, Tong Microbiome, volume 9, issue 1 (2021). 10.1186/s40168-021-01151-5 Cited by (43) \| Cite \| Source
Recoding of stop codons expands the metabolic potential of two novel Asgardarchaeota lineages (journal article) Sun, Jiarui \| Evans, Paul N \| Gagen, Emma J \| Woodcroft, Ben J \| Hedlund, Brian P \| Woyke, Tanja \| Hugenholtz, Philip \| Rinke, Christian ISME Communications, volume 1, issue 1 (2021). 10.1038/s43705-021-00032-0 Cited by (22) \| Cite \| Source
Diverse sediment microbiota shape methane emission temperature sensitivity in Arctic lakes (journal article) Emerson, Joanne B. \| Varner, Ruth K. \| Wik, Martin \| Parks, Donovan H. \| Neumann, Rebecca B. \| Johnson, Joel E. \| Singleton, Caitlin M. \| Woodcroft, Ben J. \| Tollerson, Rodney \| Owusu-Dommey, Akosua \| ... \| Rich, Virginia I. Nature Communications, volume 12, issue 1 (2021). 10.1038/s41467-021-25983-9 Cited by (16) \| Cite \| Source
Undinarchaeota illuminate DPANN phylogeny and the impact of gene transfer on archaeal evolution (journal article) Dombrowski, Nina \| Williams, Tom A. \| Sun, Jiarui \| Woodcroft, Benjamin J. \| Lee, Jun-Hoe \| Minh, Bui Quang \| Rinke, Christian \| Spang, Anja Nature Communications, volume 11, issue 1 (2020). 10.1038/s41467-020-17408-w Cited by (61) \| Cite \| Source
Sequenceserver: A Modern Graphical User Interface for Custom BLAST Databases (journal article) Priyam, Anurag \| Woodcroft, Ben J \| Rai, Vivek \| Moghul, Ismail \| Munagala, Alekhya \| Ter, Filip \| Chowdhary, Hiten \| Pieniak, Iwo \| Maynard, Lawrence J \| Gibbins, Mark Anthony \| ... \| Wurm, Yannick Molecular Biology and Evolution, volume 36, issue 12, pages 2922-2924 (2019). 10.1093/molbev/msz185 Cited by (140) \| Cite \| Source
Divergent methyl-coenzyme M reductase genes in a deep-subseafloor Archaeoglobi (journal article) Boyd, Joel A \| Jungbluth, Sean P \| Leu, Andy O \| Evans, Paul N \| Woodcroft, Ben J \| Chadwick, Grayson L \| Orphan, Victoria J \| Amend, Jan P \| Rappé, Michael S \| Tyson, Gene W The ISME Journal, volume 13, issue 5, pages 1269-1279 (2019). 10.1038/s41396-018-0343-2 Cited by (46) \| Cite \| Source
An evolving view of methane metabolism in the Archaea (journal article) Evans, Paul N. \| Boyd, Joel A. \| Leu, Andy O. \| Woodcroft, Ben J. \| Parks, Donovan H. \| Hugenholtz, Philip \| Tyson, Gene W. Nature Reviews Microbiology, volume 17, issue 4, pages 219-232 (2019). 10.1038/s41579-018-0136-7 Cited by (335) \| Cite \| Source
Microbial Community Analyses Inform Geochemical Reaction Network Models for Predicting Pathways of Greenhouse Gas Production (journal article) Wilson, Rachel M. \| Neumann, Rebecca B. \| Crossen, Kelsey B. \| Raab, Nicole M. \| Hodgkins, Suzanne B. \| Saleska, Scott R. \| Bolduc, Ben \| Woodcroft, Ben J. \| Tyson, Gene W. \| Chanton, Jeffrey P. \| Rich, Virginia I. Frontiers in Earth Science, volume 7 (2019). 10.3389/feart.2019.00059 Cited by (12) \| Cite \| Source
Peer Review #1 of "imGLAD: accurate detection and quantification of target organisms in metagenomes (v0.1)" (journal article) Woodcroft, Bj PeerJ (2018). 10.7287/peerj.5882v0.1/reviews/1 Cite \| Source
Soil Viruses Are Underexplored Players in Ecosystem Carbon Processing (journal article) Trubl, Gareth \| Jang, Ho Bin \| Roux, Simon \| Emerson, Joanne B. \| Solonenko, Natalie \| Vik, Dean R. \| Solden, Lindsey \| Ellenbogen, Jared \| Runyon, Alexander T. \| Bolduc, Benjamin \| ... \| Rich, Virginia I. mSystems, volume 3, issue 5 (2018). 10.1128/mSystems.00076-18 Cited by (197) \| Cite \| Source
Methanotrophy across a natural permafrost thaw environment (journal article) Singleton, Caitlin M \| McCalley, Carmody K \| Woodcroft, Ben J \| Boyd, Joel A \| Evans, Paul N \| Hodgkins, Suzanne B \| Chanton, Jeffrey P \| Frolking, Steve \| Crill, Patrick M \| Saleska, Scott R \| ... \| Tyson, Gene W The ISME Journal, volume 12, issue 10, pages 2544-2558 (2018). 10.1038/s41396-018-0065-5 Cited by (84) \| Cite \| Source \| Open Access
Divergent methyl-coenzyme M reductase genes in a deep-subseafloor Archaeoglobi (journal article) Boyd, Joel A. \| Jungbluth, Sean P. \| Leu, Andy O. \| Evans, Paul N. \| Woodcroft, Ben J. \| Chadwick, Grayson L. \| Orphan, Victoria J. \| Amend, Jan P. \| Rappé, Michael S. \| Tyson, Gene W. bioRxiv (2018). 10.1101/390617 Cite \| Source \| Open Access
Genome-centric view of carbon processing in thawing permafrost (journal article) Woodcroft, Ben J. \| Singleton, Caitlin M. \| Boyd, Joel A. \| Evans, Paul N. \| Emerson, Joanne B. \| Zayed, Ahmed A. F. \| Hoelzle, Robert D. \| Lamberton, Timothy O. \| McCalley, Carmody K. \| Hodgkins, Suzanne B. \| ... \| Tyson, Gene W. Nature, volume 560, issue 7716, pages 49-54 (2018). 10.1038/s41586-018-0338-1 Cited by (259) \| Cite \| Source
Host-linked soil viral ecology along a permafrost thaw gradient (journal article) Emerson, Joanne B. \| Roux, Simon \| Brum, Jennifer R. \| Bolduc, Benjamin \| Woodcroft, Ben J. \| Jang, Ho Bin \| Singleton, Caitlin M. \| Solden, Lindsey M. \| Naas, Adrian E. \| Boyd, Joel A. \| ... \| Sullivan, Matthew B. Nature Microbiology, volume 3, issue 8, pages 870-880 (2018). 10.1038/s41564-018-0190-y Cited by (305) \| Cite \| Source
GraftM: a tool for scalable, phylogenetically informed classification of genes within metagenomes (journal article) Boyd, Joel A \| Woodcroft, Ben J \| Tyson, Gene W Nucleic Acids Research, volume 46, issue 10, pages e59-e59 (2018). 10.1093/nar/gky174 Cited by (99) \| Cite \| Source \| Open Access