John D. Blischak

ScholarGPS® ID: 52870004931464

Affiliation

University of Chicago, Chicago, United States

Affiliation History

Field

Life Sciences

Discipline

Genetics

Top Specialties

Gene Expression | Fatty Liver Disease

Metrics Summary

Publication Count

Predicted Citations

1,138

Predicted h-index

Ranking

Publications and Citation History

Publications based on Top Specialties

Types of Publication

Publications
Books
Patents
NIH/NSF

Add Delete
Characterizing and inferring quantitative cell cycle phase in single-cell RNA-seq data analysis (journal article) Hsiao, Chiaowen Joyce \| Tung, PoYuan \| Blischak, John D. \| Burnett, Jonathan E. \| Barr, Kenneth A. \| Dey, Kushal K. \| Stephens, Matthew \| Gilad, Yoav Genome Research, volume 30, issue 4, pages 611-621 (2020). 10.1101/gr.247759.118 Cited by (45) \| Cite \| Source
Discovery and characterization of variance QTLs in human induced pluripotent stem cells (journal article) Sarkar, Abhishek K. \| Tung, Po-Yuan \| Blischak, John D. \| Burnett, Jonathan E. \| Li, Yang I. \| Stephens, Matthew \| Gilad, Yoav PLOS Genetics, volume 15, issue 4, pages e1008045- (2019). 10.1371/journal.pgen.1008045 Cited by (40) \| Cite \| Source
Creating and sharing reproducible research code the workflowr way (journal article) Blischak, John D. \| Carbonetto, Peter \| Stephens, Matthew F1000Research, volume 8 (2019). 10.12688/f1000research.20843.1 Cited by (36) \| Cite \| Source
A comparative study of endoderm differentiation in humans and chimpanzees (journal article) Blake, Lauren E. \| Thomas, Samantha M. \| Blischak, John D. \| Hsiao, Chiaowen Joyce \| Chavarria, Claudia \| Myrthil, Marsha \| Gilad, Yoav \| Pavlovic, Bryan J. Genome Biology, volume 19, issue 1 (2018). 10.1186/s13059-018-1490-5 Cited by (24) \| Cite \| Source
Discovery and characterization of variance QTLs in human induced pluripotent stem cells (journal article) Sarkar, Abhishek \| Tung, Po-Yuan \| Blischak, John \| Burnett, Jonathan E. \| Li, Yang I. \| Stephens, Matthew \| Gilad, Yoav bioRxiv (2018). 10.1101/424192 Cited by (1) \| Cite \| Source
A Methodological Assessment and Characterization of Genetically-Driven Variation in Three Human Phosphoproteomes (journal article) Engelmann, Brett W. \| Hsiao, Chiaowen Joyce \| Blischak, John D. \| Fourne, Yannick \| Khan, Zia \| Ford, Michael \| Gilad, Yoav Scientific Reports, volume 8, issue 1 (2018). 10.1038/s41598-018-30587-3 Cited by (2) \| Cite \| Source \| Open Access
Determining the genetic basis of anthracycline-cardiotoxicity by molecular response QTL mapping in induced cardiomyocytes (journal article) Knowles, David A \| Burrows, Courtney K \| Blischak, John D \| Patterson, Kristen M \| Serie, Daniel J \| Norton, Nadine \| Ober, Carole \| Pritchard, Jonathan K \| Gilad, Yoav eLife, volume 7 (2018). 10.7554/eLife.33480 Cited by (76) \| Cite \| Source \| Open Access
Predicting susceptibility to tuberculosis based on gene expression profiling in dendritic cells (journal article) Blischak, John D. \| Tailleux, Ludovic \| Myrthil, Marsha \| Charlois, Cécile \| Bergot, Emmanuel \| Dinh, Aurélien \| Morizot, Gloria \| Chény, Olivia \| Platen, Cassandre Von \| Herrmann, Jean-Louis \| ... \| Gilad, Yoav Scientific Reports, volume 7, issue 1 (2017). 10.1038/s41598-017-05878-w Cited by (8) \| Cite \| Source \| Open Access
Batch effects and the effective design of single-cell gene expression studies (journal article) Tung, Po-Yuan \| Blischak, John D. \| Hsiao, Chiaowen Joyce \| Knowles, David A. \| Burnett, Jonathan E. \| Pritchard, Jonathan K. \| Gilad, Yoav Scientific Reports, volume 7, issue 1 (2017). 10.1038/srep39921 Cited by (229) \| Cite \| Source \| Open Access
Patterns of Transcriptional Response to 1,25-Dihydroxyvitamin D3 and Bacterial Lipopolysaccharide in Primary Human Monocytes (journal article) Kariuki, Silvia N \| Blischak, John D \| Nakagome, Shigeki \| Witonsky, David B \| Di Rienzo, Anna G3 Genes\|Genomes\|Genetics, volume 6, issue 5, pages 1345-1355 (2016). 10.1534/g3.116.028712 Cited by (7) \| Cite \| Source \| Open Access
A Quick Introduction to Version Control with Git and GitHub (journal article) Blischak, John D. \| Davenport, Emily R. \| Wilson, Greg PLOS Computational Biology, volume 12, issue 1, pages e1004668- (2016). 10.1371/journal.pcbi.1004668 Cited by (94) \| Cite \| Source \| Open Access
Mycobacterial infection induces a specific human innate immune response (journal article) Blischak, John D. \| Tailleux, Ludovic \| Mitrano, Amy \| Barreiro, Luis B. \| Gilad, Yoav Scientific Reports, volume 5, issue 1 (2015). 10.1038/srep16882 Cited by (49) \| Cite \| Source \| Open Access
Methylation QTLs Are Associated with Coordinated Changes in Transcription Factor Binding, Histone Modifications, and Gene Expression Levels (journal article) Banovich, Nicholas E. \| Lan, Xun \| McVicker, Graham \| van de Geijn, Bryce \| Degner, Jacob F. \| Blischak, John D. \| Roux, Julien \| Pritchard, Jonathan K. \| Gilad, Yoav PLoS Genetics, volume 10, issue 9, pages e1004663- (2014). 10.1371/journal.pgen.1004663 Cited by (213) \| Cite \| Source \| Open Access
P02-23 Differential effects of GH versus IGF-1 during obesity (journal article) List, E.O. \| Berryman, D.E. \| Blischak, J.D. \| Funk, K. \| Tysl, B. \| Kutz, L. \| Leone, R. \| Lubbers, E.R. \| Visser, W.E. \| Visser, T.J. \| Kopchick, J.J. Growth Hormone & IGF Research, volume 22 (2012). 10.1016/S1096-6374(12)60161-0 Cite \| Source
The Laron Mouse (book chapter) In Laron Syndrome - From Man to Mouse Kopchick, John J. \| Blischak, John D. Springer Berlin Heidelberg (2011) 10.1007/978-3-642-11183-9_49 Cite \| Source
The Effects of GH, IGF-1 or Combined GH/IGF-1 Therapies on Type 2 Diabetes and Nonalcoholic Fatty Liver Disease (NAFLD) in Mice. (book chapter) In Posters IX List, EO \| Berryman, DE \| Bower, B \| Blischak, JD \| Wright-Piekarski, J \| Lubbers, E \| Malgor, R \| Kopchick, JJ Endocrine Society (2010) 10.1210/endo-meetings.2010.PART3.P9.P3-448 Cite \| Source
Changes in Hepatic Gene Expression Following GH or IGF-1 Treatments in Mice with Diet-Induced Nonalcoholic Fatty Liver Disease. (book chapter) In Posters X Blischak, JD \| List, EO \| Berryman, DE \| Shen, K \| Wright-Piekarski, J \| Zacharias, A \| Kennedy, A \| Grier, M \| Davis, C \| Kopchick, JJ Endocrine Society (2010) 10.1210/endo-meetings.2010.PART3.P10.P3-453 Cite \| Source
Growth Hormone Stimulated Macrophage Infiltration and Inflammation in Adipose Tissue. (book chapter) In Posters IX Wright-Piekarski, J \| List, EO \| Blischak, JD \| Zacharias, A \| Funk, KR \| Ivins, D \| Andrews, G \| Walcutt, E \| Anderson, N \| Leone, R \| ... \| Kopchick, JJ Endocrine Society (2010) 10.1210/endo-meetings.2010.PART1.P9.P1-410 Cite \| Source
P95 Effects of GH and IGF-1 treatments on body composition, glucose metabolism and hepatic gene expression in obese/diabetic mice with nonalcoholic fatty liver disease (journal article) List, E.O. \| Blischak, J.D. \| Berryman, D.E. \| Lubbers, E. \| Malgor, R. \| Kopchick, J.J. Growth Hormone & IGF Research, volume 20 (2010). 10.1016/S1096-6374(10)70195-7 Cite \| Source