William J. Murphy

ScholarGPS® ID: 42195394211448

Highly Ranked Scholar - Prior Five Years:

#17

Mammal

Affiliation

Texas A&M University, College Station, United States

Affiliation History

Field

Life Sciences

Discipline

Biology and Biological Sciences

Top Specialties

Metrics Summary

Publication Count

145

Predicted Citations

19,414

Predicted h-index

Ranking

Publications and Citation History

Publications based on Top Specialties

Types of Publication

Publications
Books
Patents
NIH/NSF

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Toward telomere-to-telomere cat genomes for precision medicine and conservation biology (journal article) Murphy, William J. \| Harris, Andrew J. Genome Research, volume 34, issue 5, pages 655-664 (2024). 10.1101/gr.278546.123 Cite \| Source
A chromosome-scale fishing cat reference genome for the evaluation of potential germline risk variants (journal article) Carroll, Rachel A. \| Rice, Edward S. \| Murphy, William J. \| Lyons, Leslie A. \| Thibaud-Nissen, Francoise \| Coghill, Lyndon M. \| Swanson, William F. \| Terio, Karen A. \| Boyd, Tyler \| Warren, Wesley C. Scientific Reports, volume 14, issue 1 (2024). 10.1038/s41598-024-56003-7 Cite \| Source
The value of hybrid genomes: Building two highly contiguous reference genome assemblies to advance Canis genomic studies (journal article) Bredemeyer, Kevin R \| vonHoldt, Bridgett M \| Foley, Nicole M \| Childers, Isabella R \| Brzeski, Kristin E \| Murphy, William J Journal of Heredity (2024). 10.1093/jhered/esae013 Cite \| Source
The genome of the black-footed cat: Revealing a rich natural history and urgent conservation priorities for small felids (journal article) Yuan, Jiaqing \| Kitchener, Andrew C. \| Lackey, Laurie Bingaman \| Sun, Ting \| Jiangzuo, Qigao \| Tuohetahong, Yilamujiang \| Zhao, Le \| Yang, Peng \| Wang, Guiqiang \| Huang, Chen \| ... \| Li, Gang Proceedings of the National Academy of Sciences, volume 121, issue 2 (2024). 10.1073/pnas.2310763120 Cited by (3) \| Cite \| Source
Single-haplotype comparative genomics provides insights into lineage-specific structural variation during cat evolution (journal article) Bredemeyer, Kevin R. \| Hillier, LaDeana \| Harris, Andrew J. \| Hughes, Graham M. \| Foley, Nicole M. \| Lawless, Colleen \| Carroll, Rachel A. \| Storer, Jessica M. \| Batzer, Mark A. \| Rice, Edward S. \| ... \| Murphy, William J. Nature Genetics, volume 55, issue 11, pages 1953-1963 (2023). 10.1038/s41588-023-01548-y Cited by (6) \| Cite \| Source
How genomic insights into the evolutionary history of clouded leopards inform their conservation (journal article) Yuan, Jiaqing \| Wang, Guiqiang \| Zhao, Le \| Kitchener, Andrew C. \| Sun, Ting \| Chen, Wu \| Huang, Chen \| Wang, Chen \| Xu, Xiao \| Wang, Jinhong \| ... \| Li, Gang Science Advances, volume 9, issue 40 (2023). 10.1126/sciadv.adh9143 Cited by (2) \| Cite \| Source
Persistence and expansion of cryptic endangered red wolf genomic ancestry along the American Gulf coast (journal article) vonHoldt, Bridgett M. \| Brzeski, Kristin E. \| Aardema, Matthew L. \| Schell, Christopher J. \| Rutledge, Linda Y. \| Fain, Steven R. \| Shutt, Amy C. \| Linderholm, Anna \| Murphy, William J. Molecular Ecology, volume 31, issue 21, pages 5440-5454 (2022). 10.1111/mec.16200 Cited by (6) \| Cite \| Source
De novo Mutations in Domestic Cat are Consistent with an Effect of Reproductive Longevity on Both the Rate and Spectrum of Mutations (journal article) Wang, Richard J \| Raveendran, Muthuswamy \| Harris, R Alan \| Murphy, William J \| Lyons, Leslie A \| Rogers, Jeffrey \| Hahn, Matthew W Molecular Biology and Evolution, volume 39, issue 7 (2022). 10.1093/molbev/msac147 Cited by (17) \| Cite \| Source
An ancient haplotype containing antimicrobial peptide gene variants is associated with severe fungal skin disease in Persian cats (journal article) Myers, Alexandra N. \| Lawhon, Sara D. \| Diesel, Alison B. \| Bradley, Charles W. \| Rodrigues Hoffmann, Aline \| Murphy, William J. PLOS Genetics, volume 18, issue 2, pages e1010062- (2022). 10.1371/journal.pgen.1010062 Cited by (6) \| Cite \| Source
Whole-genome sequences shed light on the demographic history and contemporary genetic erosion of free-ranging jaguar (Panthera onca) populations (journal article) Lorenzana, Gustavo P. \| Figueiró, Henrique V. \| Kaelin, Christopher B. \| Barsh, Gregory S. \| Johnson, Jeremy \| Karlsson, Elinor \| Morato, Ronaldo G. \| Sana, Dênis A. \| Cullen, Laury \| May, Joares A. \| ... \| Eizirik, Eduardo Journal of Genetics and Genomics, volume 49, issue 1, pages 77-80 (2022). 10.1016/j.jgg.2021.10.006 Cited by (6) \| Cite \| Source
A new approach method for characterizing inter-species toxicodynamic variability (journal article) Burnett, Sarah D. \| Karmakar, Moumita \| Murphy, William J. \| Chiu, Weihsueh A. \| Rusyn, Ivan Journal of Toxicology and Environmental Health, Part A, volume 84, issue 24, pages 1020-1039 (2021). 10.1080/15287394.2021.1966861 Cited by (6) \| Cite \| Source
Rapid Macrosatellite Evolution Promotes X-Linked Hybrid Male Sterility in a Feline Interspecies Cross (journal article) Bredemeyer, Kevin R \| Seabury, Christopher M \| Stickney, Mark J \| McCarrey, John R \| vonHoldt, Bridgett M \| Murphy, William J Molecular Biology and Evolution, volume 38, issue 12, pages 5588-5609 (2021). 10.1093/molbev/msab274 Cited by (8) \| Cite \| Source
Genome-Wide SNPs Clarify a Complex Radiation and Support Recognition of an Additional Cat Species (journal article) Trindade, Fernanda J \| Rodrigues, Maíra R \| Figueiró, Henrique V \| Li, Gang \| Murphy, William J \| Eizirik, Eduardo Molecular Biology and Evolution, volume 38, issue 11, pages 4987-4991 (2021). 10.1093/molbev/msab222 Cited by (8) \| Cite \| Source
Genomic architecture constrained placental mammal X Chromosome evolution (journal article) Brashear, Wesley A. \| Bredemeyer, Kevin R. \| Murphy, William J. Genome Research, volume 31, issue 8, pages 1353-1365 (2021). 10.1101/gr.275274.121 Cited by (15) \| Cite \| Source
Ultracontinuous Single Haplotype Genome Assemblies for the Domestic Cat ( Felis catus ) and Asian Leopard Cat ( Prionailurus bengalensis ) (journal article) Bredemeyer, Kevin R \| Harris, Andrew J \| Li, Gang \| Zhao, Le \| Foley, Nicole M \| Roelke-Parker, Melody \| O’Brien, Stephen J \| Lyons, Leslie A \| Warren, Wesley C \| Murphy, William J Journal of Heredity, volume 112, issue 2, pages 165-173 (2021). 10.1093/jhered/esaa057 Cited by (22) \| Cite \| Source
Phylogenomics and the Genetic Architecture of the Placental Mammal Radiation (journal article) Murphy, William J. \| Foley, Nicole M. \| Bredemeyer, Kevin R. \| Gatesy, John \| Springer, Mark S. Annual Review of Animal Biosciences, volume 9, issue 1, pages 29-53 (2021). 10.1146/annurev-animal-061220-023149 Cited by (29) \| Cite \| Source
Spatiotemporal Genetic Diversity of Lions Reveals the Influence of Habitat Fragmentation across Africa (journal article) Curry, Caitlin J \| Davis, Brian W \| Bertola, Laura D \| White, Paula A \| Murphy, William J \| Derr, James N Molecular Biology and Evolution, volume 38, issue 1, pages 48-57 (2021). 10.1093/molbev/msaa174 Cited by (23) \| Cite \| Source
A new domestic cat genome assembly based on long sequence reads empowers feline genomic medicine and identifies a novel gene for dwarfism (journal article) Buckley, Reuben M. \| Davis, Brian W. \| Brashear, Wesley A. \| Farias, Fabiana H. G. \| Kuroki, Kei \| Graves, Tina \| Hillier, LaDeana W. \| Kremitzki, Milinn \| Li, Gang \| Middleton, Rondo P. \| ... \| Warren, Wesley C. PLOS Genetics, volume 16, issue 10, pages e1008926- (2020). 10.1371/journal.pgen.1008926 Cited by (73) \| Cite \| Source
Fertile male tortoiseshell cat with true chimerism 38,XY/38,XY (journal article) Bugno‐Poniewierska, Monika \| Kij, Barbara \| Witarski, Wojciech \| Wojtaszek, Magdalena \| Radko, Anna \| Podbielska, Angelika \| Szczerbal, Izabela \| Murphy, William J. Reproduction in Domestic Animals, volume 55, issue 9, pages 1139-1144 (2020). 10.1111/rda.13752 Cited by (3) \| Cite \| Source
A mitochondrial genetic divergence proxy predicts the reproductive compatibility of mammalian hybrids (journal article) Allen, Richard \| Ryan, Hannah \| Davis, Brian W. \| King, Charlotte \| Frantz, Laurent \| Irving-Pease, Evan \| Barnett, Ross \| Linderholm, Anna \| Loog, Liisa \| Haile, James \| ... \| Larson, Greger Proceedings of the Royal Society B: Biological Sciences, volume 287, issue 1928, pages 20200690- (2020). 10.1098/rspb.2020.0690 Cited by (12) \| Cite \| Source

Title	Investigators	Year	Expiration	Amount
Phylogenomics and the roles of chromosome architecture, recombination and hybridization on phylogenetic accuracy in the cat family (Felidae)	Murphy, William \| Williams, Tiffani	07-01-2018	06-30-2022	$939,059
ATOL Collaborative Research: Resolving Mammalian Phylogeny with Genomic and Morphological Approaches	Bickham, John \| Honeycutt, Rodney \| Williams, Tiffani \| Murphy, William	10-01-2006	09-30-2012	$614,500