LU Bai

ScholarGPS® ID: 25018255980685

Affiliation

Pennsylvania State University, University Park, United States

Affiliation History

Field

Life Sciences

Discipline

Biochemistry

Top Specialties

Yeast | Transcription Factor | Gene Expression

Metrics Summary

Publication Count

Predicted Citations

1,041

Predicted h-index

Ranking

Publications and Citation History

Publications based on Top Specialties

Types of Publication

Publications
Books
Patents
NIH/NSF

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Pioneer factors: nature or nurture? (journal article) Stoeber, Shane \| Godin, Holly \| Xu, Cheng \| Bai, Lu Critical Reviews in Biochemistry and Molecular Biology (2024). 10.1080/10409238.2024.2355885 Cited by (1) \| Cite \| Source
DNA methylation-based high-resolution mapping of long-distance chromosomal interactions in nucleosome-depleted regions (journal article) Li, Yi \| Lee, James \| Bai, Lu Nature Communications, volume 15, issue 1 (2024). 10.1038/s41467-024-48718-y Cite \| Source
Using Synthetic DNA Libraries to Investigate Chromatin and Gene Regulation (journal article) Kleinschmidt, Holly \| Xu, Cheng \| Bai, Lu Chromosoma, volume 132, issue 3, pages 167-189 (2023). 10.1007/s00412-023-00796-5 Cited by (1) \| Cite \| Source
Investigating pioneer factor activity and its coordination with chromatin remodelers using integrated synthetic oligo assay (journal article) Chen, Hengye \| Yan, Chao \| Dhasarathy, Archana \| Kladde, Michael \| Bai, Lu STAR Protocols, volume 4, issue 2, pages 102279- (2023). 10.1016/j.xpro.2023.102279 Cited by (1) \| Cite \| Source
Predicting nucleosome positioning using statistical equilibrium models in budding yeast (journal article) Kharerin, Hungyo \| Bai, Lu STAR Protocols, volume 4, issue 1, pages 101926- (2023). 10.1016/j.xpro.2022.101926 Cited by (1) \| Cite \| Source
Origin recognition complex harbors an intrinsic nucleosome remodeling activity (journal article) Li, Sai \| Wasserman, Michael R. \| Yurieva, Olga \| Bai, Lu \| O’Donnell, Michael E. \| Liu, Shixin Proceedings of the National Academy of Sciences, volume 119, issue 42 (2022). 10.1073/pnas.2211568119 Cited by (9) \| Cite \| Source
Nucleosome-directed replication origin licensing independent of a consensus DNA sequence (journal article) Li, Sai \| Wasserman, Michael R. \| Yurieva, Olga \| Bai, Lu \| O’Donnell, Michael E. \| Liu, Shixin Nature Communications, volume 13, issue 1 (2022). 10.1038/s41467-022-32657-7 Cited by (13) \| Cite \| Source
Partitioned usage of chromatin remodelers by nucleosome-displacing factors (journal article) Chen, Hengye \| Kharerin, Hungyo \| Dhasarathy, Archana \| Kladde, Michael \| Bai, Lu Cell Reports, volume 40, issue 8, pages 111250- (2022). 10.1016/j.celrep.2022.111250 Cited by (14) \| Cite \| Source
Chemically Induced Chromosomal Interaction (CICI) method to study chromosome dynamics and its biological roles (journal article) Du, Manyu \| Zou, Fan \| Li, Yi \| Yan, Yujie \| Bai, Lu Nature Communications, volume 13, issue 1 (2022). 10.1038/s41467-022-28416-3 Cited by (2) \| Cite \| Source
Thermodynamic modeling of genome-wide nucleosome depleted regions in yeast (journal article) Kharerin, Hungyo \| Bai, Lu PLOS Computational Biology, volume 17, issue 1, pages e1008560- (2021). 10.1371/journal.pcbi.1008560 Cited by (9) \| Cite \| Source
Ash1 and Tup1 dependent repression of the Saccharomyces cerevisiae HO promoter requires activator-dependent nucleosome eviction (journal article) Parnell, Emily J. \| Parnell, Timothy J. \| Yan, Chao \| Bai, Lu \| Stillman, David J. PLOS Genetics, volume 16, issue 12, pages e1009133- (2020). 10.1371/journal.pgen.1009133 Cited by (3) \| Cite \| Source
A Role for Mediator Core in Limiting Coactivator Recruitment in Saccharomyces cerevisiae (journal article) Yarrington, Robert M \| Yu, Yaxin \| Yan, Chao \| Bai, Lu \| Stillman, David J Genetics, volume 215, issue 2, pages 407-420 (2020). 10.1534/genetics.120.303254 Cited by (8) \| Cite \| Source
Existence, Transition, and Propagation of Intermediate Silencing States in Ribosomal DNA (journal article) Zou, Fan \| Du, Manyu \| Chen, Hengye \| Bai, Lu Molecular and Cellular Biology, volume 39, issue 23 (2019). 10.1128/MCB.00146-19 Cite \| Source
Enhancement of LacI binding in vivo (journal article) Du, Manyu \| Kodner, Seth \| Bai, Lu Nucleic Acids Research, volume 47, issue 18, pages 9609-9618 (2019). 10.1093/nar/gkz698 Cited by (15) \| Cite \| Source
Using time-lapse fluorescence microscopy to study gene regulation (journal article) Zou, Fan \| Bai, Lu Methods, volume 159-160 (2019). 10.1016/j.ymeth.2018.12.010 Cited by (9) \| Cite \| Source
Dissociation rate compensation mechanism for budding yeast pioneer transcription factors (journal article) Donovan, Benjamin T \| Chen, Hengye \| Jipa, Caroline \| Bai, Lu \| Poirier, Michael G eLife, volume 8 (2019). 10.7554/eLife.43008 Cited by (58) \| Cite \| Source
Yeast Pioneering Transcription Factors Rely on Slowed Dissociation Kinetics to Efficiently Target Nucleosomal Sites (journal article) Donovan, Benjamin T. \| Chen, Hengye \| Jipa, Caroline \| Yan, Chao \| Bai, Lu \| Poirier, Michael G. Biophysical Journal, volume 116, issue 3, pages 469a- (2019). 10.1016/j.bpj.2018.11.2531 Cite \| Source
Dissociation rate compensation mechanism for budding yeast pioneer transcription factors (journal article) Donovan, Benjamin T \| Chen, Hengye \| Jipa, Caroline \| Bai, Lu \| Poirier, Michael G. bioRxiv (2018). 10.1101/441469 Cite \| Source
Systematic Study of Nucleosome-Displacing Factors in Budding Yeast (journal article) Yan, Chao \| Chen, Hengye \| Bai, Lu Molecular Cell, volume 71, issue 2, pages 294-305.e4 (2018). 10.1016/j.molcel.2018.06.017 Cited by (70) \| Cite \| Source
Modulation of Fluorescent Protein Chromophores To Detect Protein Aggregation with Turn-On Fluorescence (journal article) Liu, Yu \| Wolstenholme, Charles H. \| Carter, Gregory C. \| Liu, Hongbin \| Hu, Hang \| Grainger, Leeann S. \| Miao, Kun \| Fares, Matthew \| Hoelzel, Conner A. \| Yennawar, Hemant P. \| ... \| Zhang, Xin Journal of the American Chemical Society, volume 140, issue 24, pages 7381-7384 (2018). 10.1021/jacs.8b02176 Cited by (154) \| Cite \| Source

Title	Investigators	Year	Cost	Agency
Mechanistic study of pioneer factors	BAI, LU	2020	$295,240	NATIONAL INSTITUTE OF GENERAL MEDICAL SCIENCES
Gene Regulation from Long-Distance Chromosomal Interactions in Yeast	BAI, LU	2020	$305,183	NATIONAL INSTITUTE OF GENERAL MEDICAL SCIENCES
Mechanistic study of pioneer factors	BAI, LU	2019	$295,856	NATIONAL INSTITUTE OF GENERAL MEDICAL SCIENCES
Gene Regulation from Long-Distance Chromosomal Interactions in Yeast	BAI, LU	2019	$305,538	NATIONAL INSTITUTE OF GENERAL MEDICAL SCIENCES
Gene Regulation from Long-Distance Chromosomal Interactions in Yeast	BAI, LU	2019	$36,400	NATIONAL INSTITUTE OF GENERAL MEDICAL SCIENCES
Mechanistic study of pioneer factors	BAI, LU	2018	$296,443	NATIONAL INSTITUTE OF GENERAL MEDICAL SCIENCES
Gene Regulation from Long-Distance Chromosomal Interactions in Yeast	BAI, LU	2018	$305,879	NATIONAL INSTITUTE OF GENERAL MEDICAL SCIENCES
Mechanistic study of pioneer factors	BAI, LU	2017	$308,298	NATIONAL INSTITUTE OF GENERAL MEDICAL SCIENCES
Gene Regulation from Long-Distance Chromosomal Interactions in Yeast	BAI, LU	2017	$306,207	NATIONAL INSTITUTE OF GENERAL MEDICAL SCIENCES
Gene Regulation from Long-Distance Chromosomal Interactions in Yeast	BAI, LU	2016	$306,521	NATIONAL INSTITUTE OF GENERAL MEDICAL SCIENCES